Biocuration- Off-page


Elucidata1

Uploaded on Mar 4, 2024

Category Technology

Biocuration is the process of collecting, organizing, and annotating biological data from various sources to make it accessible and understandable for further analysis by researchers. https://www.elucidata.io/book-a-demo

Category Technology

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Biocuration- Off-page

Biocuration: Breaking Barriers in the Use of Biomedical Data Data is Available, But Not Usable Life Sciences R&D relies on 2 trillion GB data generated every year. Public data and databases are available, not usable In-house data, often caught in team level silos has low interoperability and reusability Drug Discovery Initiatives Need High Quality Data "The value is in the data, it is not in the tools. That is the one thing, it’s a bit of a hobby horse for me. One thing I always point to in these discussions around data, don’t underestimate the amount of time and value in doing what is really often difficult and not so Public Data rewarding directly work, like (scRNA-Seq) cleaning data sets isn’t always fun, but it is often the most In-house valuable thing you can do." Experiments (scRNA-Seq) -Dr. Jeffrey Reid, Metadata Files Regeneron's Chief Data Officer (csv,txt) Getting to This High Quality Data Pool is Not Trivial 80% of Time 20% of Time Source and prepare high quality data Analysis QC and Link Data and Determine Download Process Raw Ready for Curate Metadata relevance Data Files Data Analysis Metadata files 30 mins per 60 mins per 8 hours per 8-16 hours per 1-2 hours per dataset dataset dataset dataset dataset A scientist can spend anywhere from days to weeks per month in getting their data ready for analysis. At Elucidata we’re flipping this 80-20 ratio by building technology to harmonize biomedical data and make them ML-Ready Elucidata’s Biocuration Platform- Polly Making Semi-structured Biomedical Data ML-Ready Data Polly Sources Polly Harmonization Engine Harmonized Data Stored on your Atlas Biocuration Workflow Automated Data Metadata Manual Stream Acquisition Curation using Curation of Harmonized LLMs Custom Fields Data Data collection is Model assisted Elucidata’s Data Human in the Loop simplified via API or curation leads to Model is data type allows for additional GUI upload to higher throughput, agnostic; Data from custom curation and curation the ability to scale to disparate sources is extensive QC checks infrastructure hundreds of curators made interoperable Impact: Millions of Datasets Harmonized in the Past 5 Years! Harmonization with Polly Applications Powered ● 99% accurate, customizable & 10X faster than ● Patient Stratification industry standard ● ● Biomarker DiscoveryMulti-Omics, Bioassays supported ● ● Target Discovery, Validation & QualificationData delivered on a 360 Degree Platform (Polly), complete with APIs ● Data Management ● Allows public and in-house data integration ● Knowledge Graphs ● On-going support for evolving data needs (Data ● Training Models Concierge) Reach out to us at [email protected] or Book a Demo with us to learn more.