Uploaded on Feb 25, 2025
Source: https://www.elucidata.io/
Breaking Barriers in the use of Biomedical Data- Multi-modal Data Management
Breaking Barriers in the use of Biomedical Data- Multi-modal Data Management Agenda "The value is in the data, it is not in the tools. That is the one thing, ● Introducing Polly: Platform for it’s a bit of a hobby horse for me. managing multi-modal One thing I always point to in biomedical data these discussions around data, don’t underestimate the amount ● Example of how to use of time and value in doing what is Polly: Analyzing really often difficult and not so rewarding directly work, like Metabolomics Data cleaning data sets isn’t always ● Discussion fun, but it is often the most valuable thing you can do." -Dr. Jeffrey Reid, Regeneron's Chief Data Officer Leaders in Multi-Modal Biomedical Data Management with Differentiated Technology & Expertise 1 30+ customers deriving value from our technology and expertise. 2 A malleable cloud friendly technology that can seamlessly fit into your R&D Ecosystem. 3 With a team that can quickly assimilate industry domain into high value services. Polly, A Scalable Platform for Multi-Modal Data Management Data Harmonization & Data Storage & Data Consumption Ingestion Management Polly Pipelines Polly Atlas Polly Apps Workflow orchestration Custom apps running on a For storing structured system(supports Nextflow) highly scalable infra (Hail, data in a data model IGV) Polly Curation Polly Workspaces Polly Notebooks Manual and automated For storing unstructured Data exploration/analysis data curation data using Jupyter notebooks Polly Sync Import files from many external sources 25+ Data types Supported PBs Integrof Data stored 10+ BI Analysis& aotins to ML, oolsT 35 of datasets processed and < To query millions of TBs harmonized / month secs records at once 17+ 15 Propri etary W -beApplications deveolped Polly brings value on day 1 and can evolve as your analytics needs evolve 1 2 3 Managed In-built Data Raw multi-omics Cloud Security & Data to Insights Platform Governance With Polly - Fully Managed Cloud Platform From Day 1 Building this in-house could take 2 years, 15+ Engineers and millions of dollars Benefits of a fully managed cloud platform: ● New institutes can be easily onboarded on the same platform ● Support and maintenance included, with 99% uptime. ● Secure collaboration across users, multiple sites and stakeholders with granular access controls With Polly - In-built Data Security & Governance Baking in security & compliances into a data platform takes an additional 6 months With Polly your data is secure from day 1: ●Compliances Supported: SOC 2, GDPR, HIPAA ●Platform supports single sign on (SSO) services for multiple simultaneous users and role based access control. ●Enterprise-grade Authentication and Authorization. ●Deployment not dependent on geography. With Polly - Accelerate Raw Data to Insights by Multi-Fold Scalable Infrastructure that supports: ● Harmonization & Analysis of 25+ Data Types ● 2X Cheaper data processing than vanilla AWS ● Ingestion, processing & harmonization of 5000 samples per week ● Seamless Integration of new applications or pipelines on Polly’s cloud infrastructure. $ From Raw Data to Insights: Data Journey on Polly Data Data Data Data Ingestion Storage Management Visualization Intuitive Simplified data Store multi-modal Data governance, applications to ingestion via GUI or data on Polly access controls & streamline insight CLI Atlases permissions generation Eliminate Manual Data Transfers with Polly Ingestion Data Data Data Data Ingestion Storag Manageme Visualization e nt Custom GUI for Data Ingestion 5000 samples can be ingested weekly Harmonize & Index Data on a Polly Atlas Data Data Data Data Ingestio Storage Manageme Visualization n nt ● Processed, annotated with critical metadata & ǪC-ed with harmonization engine Multi-modal data is harmonized, integrated & ○LLM-powered harmonization accelerates Indexed on Polly Atlases metadata annotation by 10X ○Values & Metadata validated by experts ● Common Data model provides relational link between Patient metadata and molecular data Manage Sensitive Data & Projects over Workspaces Data Data Data Data Ingestio Storag Management Visualization n e ● Unified view of raw data, processed data & corresponding results, in the same Eliminate Data Silos, manage permissions location & control access to sensitive data assets ● Version control data, metadata & analyses. ● Control permissions & provide the right access controls to data & projects on Workspaces Streamline insight generation with Intuitive Applications Data Data Data Data Ingestio Storag Manageme Visualization n e nt ● Simplified data exploration via custom filtering options on an Atlas UI ● Seamless comparison across patient cohorts with integrated multi- source data ● Visualize & analyze on native apps like Phantasus, IGV or Intomix ● Connect with external tools like Spotfire with APIs Thank You
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